LXR Guide: Difference between revisions

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LXR, shortened for Linux Cross-Reference, is a perl web application that lets you read linux kernel source code of different versions with the benefit of having static values and functions 'linked' to each other which makes it a good reference when dealing with kernel source.
LXR, shortened for Linux Cross-Reference, is a perl web application that lets you read different versions of the Linux kernel source code with the added benefit of quickly searching the source and having static values and functions cross-referenced with each other.


== Step by Step Guide ==
== Step by Step Guide ==
The installation of LXRng are detailed in this guide for a CentOS 7 server. We will be using:
* LXRng
* PostgreSQL (as a fulltext index)
* Apache 2.4 / mod_perl
=== Prerequisites ===
=== Prerequisites ===
On a clean install of CentOS 7, install the following dependencies. A few Perl modules must be installed outside of yum and I recommend using cpanm.


Install required packages. Unfortunately, there are a few packages that are not available through yum (through default repos), and must be built through CPAN. <code>screen</code> is not a dependency, but it is nice to run the indexer through it as it can take from hours to days depending on your hardware.
{{highlight|lang=terminal|code=
# yum install postgresql postgresql-server \
perl-App-cpanminus \
xapian-core xapian-core-devel \
perl-DBI perl-DBD-Pg \
perl-Term-ProgressBar \
perl-Pod-POM \
perl-CGI \
perl-HTML-Template \
perl-XML-Parser \
perl-XML-NamespaceSupport \
perl-XML-LibXML \
perl-XML-SAX-Base \
perl-Image-Xbm \
perl-Image-Base \
perl-Template-Toolkit \
perl-Linux-Pid \
perl-BSD-Resource \
make gcc gcc-c++  \
ctags \
httpd \
mod_perl mod_ssl \
git \
screen
}}


<syntaxhighlight lang="bash" line start="1" enclose="div">
lxr expects it as <code>ctag</code> as <code>ctags-exuberant</code>.
yum --nogpgcheck install \
    perl-CGI-Ajax \
    perl-CGI-Simple \
    perl-CPAN \
    perl-DBD-Pg \
    perl-DBI \
    perl-Devel-Size \
    perl-ExtUtils-CBuilder \
    perl-ExtUtils-MakeMaker \
    perl-ExtUtils-Embed \
    perl-PerlIO-gzip \
    perl-HTML-Entities* \
    perl-Term-ProgressBar \
    perl-Template* \
    xapian* \
    postgresql postgresql-server \
    httpd \
    mod_perl \
    mod_perl-devel \
    ctags-etags \
    make gcc gcc-c++ \
    git \
    screen
</syntaxhighlight>


lxr expects it as <code>ctag</code> as <code>ctags-exuberant</code>.
{{highlight|lang=terminal|code=
# ln -s /usr/bin/ctags /usr/bin/ctags-exuberant
}}


<syntaxhighlight lang="bash" line start="1" enclose="div">
Install the missing dependencies through cpanm:
ln -s /usr/bin/ctags /usr/bin/ctags-exuberant
</syntaxhighlight>


Install the missing dependencies through CPAN:
{{highlight|lang=terminal|code=
# cpanm Search::Xapian
# cpanm Test::More
# cpanm Devel::Size
}}


<syntaxhighlight lang="bash" line start="1" enclose="div">
Pull the lxrng source into {{code|/var/www}}. Apache will own everything since the web server will need to run the web application.
perl -MCPAN -e "install Search::Xapian Apache2::Reload"
</syntaxhighlight>


{{highlight|lang=terminal|code=
# cd /var/www
# chgrp apache .
# sudo -u apache git clone git://lxr.linux.no/git/lxrng.git
}}


=== Setting up PostgreSQL ===
=== Setting up PostgreSQL ===
Line 49: Line 62:
With PostgreSQL installed, set it up with a lxrng database. You may want to set up permissions as well, but I will be using the root account.
With PostgreSQL installed, set it up with a lxrng database. You may want to set up permissions as well, but I will be using the root account.


<syntaxhighlight lang="bash" line start="1" enclose="div">
{{highlight|lang=terminal|code=
/etc/init.d/postgresql initdb
# postgresql-setup initdb
/etc/init.d/postgresql start
# systemctl start postgresql
# systemctl enable postgresql
}}


sudo -u postgres psql
By default, Postgres should be configured to use system accounts for authentication. Since we will have the Apache web server running as {{code|apache}}, we will create a Postgres account named {{code|apache}} that should have access to the lxrng database.
  ALTER USER postgres WITH ENCRYPTED PASSWORD 'lxrng';
  CREATE DATABASE lxrng;
  \q


# Use passwords
sed -i "s/ident$/md5/g" /var/lib/pgsql/data/pg_hba.conf


# Apply changes by restarting
{{highlight|lang=terminal|code=
/etc/init.d/postgresql restart
# su postgres
$ createuser -d apache
}}


# Make sure postgres starts on startup
chkconfig postgresql on --level 345
</syntaxhighlight>


=== LXRng Setup ===
=== LXRng Setup ===
We will be putting LXRng into <code>/export</code>
The {{code|lxrng.conf}} configuration file located at {{/var/www/lxrng/lxrng.conf}} should contain the following:
 
{{highlight|lang=text|code=
# -*- mode: perl -*-
# Configuration file
#
#
 
use LXRng::Index::PgBatch;
use LXRng::Repo::Git;
use LXRng::Search::Xapian;
 
my $gitrepo = LXRng::Repo::Git
    ->new('/var/www/lxrng/repos/linux-2.6/.git',
          release_re => qr/^v[^-]*$/,
          author_timestamp => 0);
 
my $index  = LXRng::Index::PgBatch->new(db_spec => 'dbname=lxrng;port=5432',
                                        db_user => "apache", db_pass => "",
                                        # table_prefix => 'lxr'
                                        );
my $search  = LXRng::Search::Xapian->new('/var/www/lxrng/text-db/linux-2.6');
 
return {
    'linux' => {
        'repository'  => $gitrepo,
        'index'      => $index,
        'search'      => $search,
 
        'base_url'    => 'http://lxr.cpsc.ucalgary.ca/',
        # Must be writable by httpd user:
        'cache'      => '/var/www/lxrng/cache',
 
        'fs_charset'  => 'iso-8859-1',
        # Tried successively
        'content_charset' => ['utf-8', 'iso-8859-1'],
 
        'languages'  => ['C', 'GnuAsm', 'Kconfig'],
        #'ctags_flags' => ["-I\@$LXRng::ROOT/lxr-ctags-quirks"],
        'ver_list'    => [$gitrepo->allversions],


<syntaxhighlight lang="bash" line start="1" enclose="div">
        'ver_default' => 'v4.9',
mkdir /export
cd /export
# Source is from git. If unavailable, there is a copy at http://pages.cpsc.ucalgary.ca/~leo/support/packages/src/lxrng*.tar.gz
git clone git://lxr.linux.no/git/lxrng.git
</syntaxhighlight>


Edit LXRng's configuration at lxrng.conf. Make sure the database settings and URL is correct.
        'include_maps' =>
            [
            [qr{{!}}^arch/(.*?)/{{!}}, qr{{!}}^asm/(.*){{!}},
              sub { "include/asm-$_[0]/$_[1]" }],
            [qr{{!}}^include/asm-(.*?)/{{!}}, qr{{!}}^asm/(.*){{!}},
              sub { "include/asm-$_[0]/$_[1]" }],
            [qr{{!}}^{{!}}, qr{{!}}^asm/(.*){{!}},
              sub { map { "include/asm-$_/$_[0]" }
                    qw(i386 alpha arm ia64 m68k mips mips64),
                    qw(ppc s390 sh sparc sparc64 x86_64) }],
            [qr{{!}}^{{!}}, qr{{!}}(.*){{!}},
              sub { "include/$_[0]" }],
            ],
    },
};


<syntaxhighlight lang="bash" line start="1" enclose="div">
}}
cd lxrng
cp lxrng.conf-dist lxrng.conf
sed -i "s/\/var\/lib/\/export/g" /export/lxrng/lxrng.conf
sed -i "s/db_user => \"\"/db_user => \"postgres\"/g" /export/lxrng/lxrng.conf
sed -i "s/db_pass => \"\"/db_pass => \"lxrng\"/g" /export/lxrng/lxrng.conf
sed -i "s/localhost/lxr.lab.cpsc.ucalgary.ca/g" /export/lxrng/lxrng.conf
sed -i "s/'ver_default'\s*=>\s*'[a-z0-9.]*'/'ver_default' => 'v2.6.32'/g" /export/lxrng/lxrng.conf
</syntaxhighlight>


Set up a few directories such as <code>repos</code> which will contain all the source code to be referenced.
There are a few important values which you may want to change:
* {{code|$gitrepo}} defines where the source code (as a git repo) will be placed. In our case, {{code|/var/www/lxrng/repos}} should contain a directory called {{code|linux-2.6/.git}} containing the git repository.
* {{code|$search}} defines where the text index should reside
* {{code|base_url}} is the URL of the web application
* {{code|cache}} is the cache directory used by lxr.


<syntaxhighlight lang="bash" line start="1" enclose="div">
Create these directories, and ensure they are readable and writable by apache:
mkdir repos
{{highlight|lang=terminal|code=
mkdir -p text-db/linux-2.6
# cd /var/www/lxrng
mkdir cache
# mkdir repos
chmod 777 cache
# mkdir -p text-db/linux-2.6
touch lxr-ctags-quirks
# mkdir cache
</syntaxhighlight>
# chmod 777 cache
}}


=== Fetch the Kernel Source ===
=== Fetch the Kernel Source ===
Get the source code either via git or from an existing tarball.
Get the source code either via git or from an existing tarball.


<syntaxhighlight lang="bash" line start="1" enclose="div">
{{highlight|lang=terminal|code=
cd repos
cd /var/www/lxrng/repos
 
# git clone git://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux-2.6.git
# wget http://pages.cpsc.ucalgary.ca/~leo/support/linux-2.6-source.tar.gz -O - | tar -xzf -
git clone git://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux-2.6.git


# or for the newest post-2.6 kernels:
# or for the newest post-2.6 kernels:
Line 115: Line 167:
Start the indexing process:
Start the indexing process:


<syntaxhighlight lang="bash" line start="1" enclose="div">
{{highlight|lang=terminal|code=
cd /export/lxrng
# cd /var/www/lxrng/
./lxr-db-admin linux --init
# sudo -u apache sh
screen -d -m ./lxr-genxref linux
$ ./lxr-db-admin linux --init
</syntaxhighlight>
$ ./lxr-genxref linux
# Or alternatively, run it in screen: screen -d -m ./lxr-genxref linux
}}


=== Setting up Apache ===
=== Setting up Apache ===

Revision as of 19:39, 19 January 2017

LXR, shortened for Linux Cross-Reference, is a perl web application that lets you read different versions of the Linux kernel source code with the added benefit of quickly searching the source and having static values and functions cross-referenced with each other.

Step by Step Guide

The installation of LXRng are detailed in this guide for a CentOS 7 server. We will be using:

  • LXRng
  • PostgreSQL (as a fulltext index)
  • Apache 2.4 / mod_perl

Prerequisites

On a clean install of CentOS 7, install the following dependencies. A few Perl modules must be installed outside of yum and I recommend using cpanm.

# yum install postgresql postgresql-server \
perl-App-cpanminus \
xapian-core xapian-core-devel \
perl-DBI perl-DBD-Pg \
perl-Term-ProgressBar \
perl-Pod-POM \
perl-CGI \
perl-HTML-Template \
perl-XML-Parser \
perl-XML-NamespaceSupport \
perl-XML-LibXML \
perl-XML-SAX-Base \
perl-Image-Xbm \
perl-Image-Base \
perl-Template-Toolkit \
perl-Linux-Pid \
perl-BSD-Resource \
make gcc gcc-c++  \
ctags \
httpd \
mod_perl mod_ssl \
git \
screen

lxr expects it as ctag as ctags-exuberant.

# ln -s /usr/bin/ctags /usr/bin/ctags-exuberant

Install the missing dependencies through cpanm:

# cpanm Search::Xapian
# cpanm Test::More
# cpanm Devel::Size

Pull the lxrng source into /var/www. Apache will own everything since the web server will need to run the web application.

# cd /var/www
# chgrp apache .
# sudo -u apache git clone git://lxr.linux.no/git/lxrng.git

Setting up PostgreSQL

With PostgreSQL installed, set it up with a lxrng database. You may want to set up permissions as well, but I will be using the root account.

# postgresql-setup initdb
# systemctl start postgresql
# systemctl enable postgresql

By default, Postgres should be configured to use system accounts for authentication. Since we will have the Apache web server running as apache, we will create a Postgres account named apache that should have access to the lxrng database.


# su postgres
$ createuser -d apache


LXRng Setup

The lxrng.conf configuration file located at Template:/var/www/lxrng/lxrng.conf should contain the following:

# -*- mode: perl -*-
# Configuration file
#
#

use LXRng::Index::PgBatch;
use LXRng::Repo::Git;
use LXRng::Search::Xapian;

my $gitrepo = LXRng::Repo::Git
    ->new('/var/www/lxrng/repos/linux-2.6/.git',
          release_re => qr/^v[^-]*$/,
          author_timestamp => 0);

my $index   = LXRng::Index::PgBatch->new(db_spec => 'dbname=lxrng;port=5432',
                                         db_user => "apache", db_pass => "",
                                         # table_prefix => 'lxr'
                                         );
my $search  = LXRng::Search::Xapian->new('/var/www/lxrng/text-db/linux-2.6');

return {
    'linux' => {
        'repository'  => $gitrepo,
        'index'       => $index,
        'search'      => $search,

        'base_url'    => 'http://lxr.cpsc.ucalgary.ca/',
        # Must be writable by httpd user:
        'cache'       => '/var/www/lxrng/cache',

        'fs_charset'  => 'iso-8859-1',
        # Tried successively
        'content_charset' => ['utf-8', 'iso-8859-1'],

        'languages'   => ['C', 'GnuAsm', 'Kconfig'],
        #'ctags_flags' => ["-I\@$LXRng::ROOT/lxr-ctags-quirks"],
        'ver_list'    => [$gitrepo->allversions],

        'ver_default' => 'v4.9',

        'include_maps' =>
            [
             [qr|^arch/(.*?)/|, qr|^asm/(.*)|,
              sub { "include/asm-$_[0]/$_[1]" }],
             [qr|^include/asm-(.*?)/|, qr|^asm/(.*)|,
              sub { "include/asm-$_[0]/$_[1]" }],
             [qr|^|, qr|^asm/(.*)|,
              sub { map { "include/asm-$_/$_[0]" }
                    qw(i386 alpha arm ia64 m68k mips mips64),
                    qw(ppc s390 sh sparc sparc64 x86_64) }],
             [qr|^|, qr|(.*)|,
              sub { "include/$_[0]" }],
             ],
    },
};

There are a few important values which you may want to change:

  • $gitrepo defines where the source code (as a git repo) will be placed. In our case, /var/www/lxrng/repos should contain a directory called linux-2.6/.git containing the git repository.
  • $search defines where the text index should reside
  • base_url is the URL of the web application
  • cache is the cache directory used by lxr.

Create these directories, and ensure they are readable and writable by apache:

# cd /var/www/lxrng
# mkdir repos
# mkdir -p text-db/linux-2.6
# mkdir cache
# chmod 777 cache

Fetch the Kernel Source

Get the source code either via git or from an existing tarball.

{{highlight|lang=terminal|code= cd /var/www/lxrng/repos

  1. git clone git://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux-2.6.git
  1. or for the newest post-2.6 kernels:

git clone git://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux.git </syntaxhighlight>

Start the indexing process:

# cd /var/www/lxrng/
# sudo -u apache sh
$ ./lxr-db-admin linux --init
$ ./lxr-genxref linux
# Or alternatively, run it in screen: screen -d -m ./lxr-genxref linux

Setting up Apache

cd /export/lxrng
cp apache2-site.conf-dist-mod_perl /etc/httpd/conf.d/lxrng.conf
sed -i "s/@@LXRROOT@@/\/export\/lxrng/g" /etc/httpd/conf.d/lxrng.conf
sed -i "s/@@LXRURL@@/lxr/g" /etc/httpd/conf.d/lxrng.conf
sed -i "s/^[\(^#\)]*/# /" /etc/httpd/conf.d/welcome.conf
/etc/init.d/httpd start
chkconfig httpd on --level 345


Run 'screen -r' to view the progress of the cross reference generation progress


Updating Kernel Source

cd repos
git pull git://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux-2.6.git master